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Michael Droy

There is a more basic problem. What if new cases are not driven by actual new infections but something much earlier? Lets suppose new cases are driven by increased testing, and increased testing is driven in practice by increased deaths and government/local authority response to test more (or perhaps in smart locations, increased hospitalization as an indicator of imminent deaths).
In other words the test results are being driven by events (deaths) that in turn are driven by initial events (initial infection) 3-4 weeks earlier.

In this situation the Red line is not predicting the black line 1 week later, it is "predicting" the cause of the black line 2-3 weeks earlier. A pretty useless prediction I'm sure you'll agree.

And Deaths driving test results is almost certain to be the case.

Caroline Whately-Smith

I heard about this work on the BBC World Service (Science Matters). I think it is fascinating, and perhaps this data may provide a more objective estimate of the extent of Covid-19 infection rather than a way of "predicting" future patterns. In particular it would be very interesting to see comparative data from several areas where the prevalence of Covid-19 is known to differ. However the paper raises so many questions for me:
1. The daily sludge data is essentially correlated as the samples will represent the sludge collected from pretty much the same group of people over time whereas the epidemiological data will only count each person once (will it? or might some admissions be the same as earlier tested patients?)
2. The authors state that the concentration results were "normalized": how?
3. Was any investigation into the distribution of the concentration data done? Was it Normally distributed and if not, were any data transformations explored? Does this matter in this context?
4. I was not absolutely clear on how the replicates were defined. Assuming that the sludge samples were split into two to form these replicates, then is a simple regression of the data from these replicates appropriate? If this is the case I would be surprised if there were not a very high correlation between replicates. Perhaps an analysis where the structure of the data i.e. incorporating the replicates, would be more appropriate?

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